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Dr Dominique Chaput

Dr Dominique Chaput

Postdoctoral researcher

 Geoffrey Pope 201

 

Geoffrey Pope Building, University of Exeter , Stocker Road, Exeter, EX4 4QD, UK

Overview

I use molecular methods to explore microbial diversity in a wide range of environments. Previous projects have included profiling microbial communities on exposed Arctic granite bedrock, on lava flows, and in metal-contaminated coal mine drainage treatment systems.

I am currently involved in the BBSRC-funded ROBUST-SMOLT project, investigating the impact of elevated CO2 on the physiology and microbiome of salmon smolts. I've also worked on a large multidisciplinary project supported by the Newton Fund Global Research Partnership in Aquaculture, with partners in Bangladesh, India and Malawi, to develop novel molecular approaches for predicting and mitigating disease outbreaks in small scale aquaculture farming.

Research

Publications

Key publications | Publications by category | Publications by year

Key publications


Chaput DL, Fowler AJ, Seo O, Duhn K, Hansel CM, Santelli CM (2019). Mn oxide formation by phototrophs: Spatial and temporal patterns, with evidence of an enzymatic superoxide-mediated pathway. Sci Rep, 9(1). Abstract.  Author URL.

Publications by category


Journal articles

Cutler NA, Arróniz-Crespo M, Street LE, Jones DL, Chaput DL, DeLuca TH (2020). Correction to: Long-Term Recovery of Microbial Communities in the Boreal Bryosphere Following Fire Disturbance (Microbial Ecology, (2017), 73, 1, (75-90), 10.1007/s00248-016-0832-7). Microbial Ecology, 79(2). Abstract.
Chaput DL, Bass D, Alam MM, Al Hasan N, Stentiford GD, van Aerle R, Moore K, Bignell JP, Haque MM, Tyler CR, et al (2020). The Segment Matters: Probable Reassortment of Tilapia Lake Virus (TiLV) Complicates Phylogenetic Analysis and Inference of Geographical Origin of New Isolate from Bangladesh. Viruses, 12(3), 258-258. Abstract.  Full text.
Chaput DL, Fowler AJ, Seo O, Duhn K, Hansel CM, Santelli CM (2019). Mn oxide formation by phototrophs: Spatial and temporal patterns, with evidence of an enzymatic superoxide-mediated pathway. Sci Rep, 9(1). Abstract.  Author URL.
Zeiner CA, Purvine SO, Zink EM, Paša-Tolić L, Chaput DL, Wu S, Santelli CM, Hansel CM (2017). Quantitative iTRAQ-based secretome analysis reveals species-specific and temporal shifts in carbon utilization strategies among manganese(II)-oxidizing Ascomycete fungi. Fungal Genetics and Biology, 106, 61-75.
Zeiner CA, Purvine SO, Zink EM, Paša-Tolić L, Chaput DL, Haridas S, Wu S, LaButti K, Grigoriev IV, Henrissat B, et al (2016). Comparative Analysis of Secretome Profiles of Manganese(II)-Oxidizing Ascomycete Fungi. PLOS ONE, 11(7), e0157844-e0157844.
Cutler NA, Arróniz-Crespo M, Street LE, Jones DL, Chaput DL, DeLuca TH (2016). Long-Term Recovery of Microbial Communities in the Boreal Bryosphere Following Fire Disturbance. Microbial Ecology, 73(1), 75-90.
Chaput DL, Hansel CM, Burgos WD, Santelli CM (2015). Profiling microbial communities in manganese remediation systems treating coal mine drainage. Applied and Environmental Microbiology, 81(6), 2189-2198. Abstract.
Cutler NA, Chaput DL, Oliver AE, Viles HA (2015). The spatial organization and microbial community structure of an epilithic biofilm. FEMS Microbiology Ecology, 91(3). Abstract.
Cutler NA, Chaput DL, van der Gast CJ (2014). Long-term changes in soil microbial communities during primary succession. Soil Biology and Biochemistry, 69, 359-370. Abstract.
Santelli CM, Chaput DL, Hansel CM (2014). Microbial Communities Promoting Mn(II) Oxidation in Ashumet Pond, a Historically Polluted Freshwater Pond Undergoing Remediation. Geomicrobiology Journal, 31(7), 605-616. Abstract.
Viles HA, Naylor LA, Carter NEA, Chaput D (2008). Biogeomorphological disturbance regimes: progress in linking ecological and geomorphological systems. Earth Surface Processes and Landforms, 33, 1419-1425. Abstract.

Publications by year


2020

Cutler NA, Arróniz-Crespo M, Street LE, Jones DL, Chaput DL, DeLuca TH (2020). Correction to: Long-Term Recovery of Microbial Communities in the Boreal Bryosphere Following Fire Disturbance (Microbial Ecology, (2017), 73, 1, (75-90), 10.1007/s00248-016-0832-7). Microbial Ecology, 79(2). Abstract.
Chaput DL, Bass D, Alam MM, Al Hasan N, Stentiford GD, van Aerle R, Moore K, Bignell JP, Haque MM, Tyler CR, et al (2020). The Segment Matters: Probable Reassortment of Tilapia Lake Virus (TiLV) Complicates Phylogenetic Analysis and Inference of Geographical Origin of New Isolate from Bangladesh. Viruses, 12(3), 258-258. Abstract.  Full text.
Chaput D (2020). TiLV alignments of all ten segments with seven whole-genome isolates.  Abstract.
Chaput D (2020). TiLV alignments of partial segments 1, 2, 3, 4 and 9 with all available references.  Abstract.
Chaput D (2020). TiLV quartet phylogenetic analysis to detect reassortment.  Abstract.  Author URL.

2019

Chaput DL, Fowler AJ, Seo O, Duhn K, Hansel CM, Santelli CM (2019). Mn oxide formation by phototrophs: Spatial and temporal patterns, with evidence of an enzymatic superoxide-mediated pathway. Sci Rep, 9(1). Abstract.  Author URL.

2017

Zeiner CA, Purvine SO, Zink EM, Paša-Tolić L, Chaput DL, Wu S, Santelli CM, Hansel CM (2017). Quantitative iTRAQ-based secretome analysis reveals species-specific and temporal shifts in carbon utilization strategies among manganese(II)-oxidizing Ascomycete fungi. Fungal Genetics and Biology, 106, 61-75.

2016

Zeiner CA, Purvine SO, Zink EM, Paša-Tolić L, Chaput DL, Haridas S, Wu S, LaButti K, Grigoriev IV, Henrissat B, et al (2016). Comparative Analysis of Secretome Profiles of Manganese(II)-Oxidizing Ascomycete Fungi. PLOS ONE, 11(7), e0157844-e0157844.
Cutler NA, Arróniz-Crespo M, Street LE, Jones DL, Chaput DL, DeLuca TH (2016). Long-Term Recovery of Microbial Communities in the Boreal Bryosphere Following Fire Disturbance. Microbial Ecology, 73(1), 75-90.

2015

Chaput DL, Hansel CM, Burgos WD, Santelli CM (2015). Profiling microbial communities in manganese remediation systems treating coal mine drainage. Applied and Environmental Microbiology, 81(6), 2189-2198. Abstract.
Cutler NA, Chaput DL, Oliver AE, Viles HA (2015). The spatial organization and microbial community structure of an epilithic biofilm. FEMS Microbiology Ecology, 91(3). Abstract.

2014

Cutler NA, Chaput DL, van der Gast CJ (2014). Long-term changes in soil microbial communities during primary succession. Soil Biology and Biochemistry, 69, 359-370. Abstract.
Santelli CM, Chaput DL, Hansel CM (2014). Microbial Communities Promoting Mn(II) Oxidation in Ashumet Pond, a Historically Polluted Freshwater Pond Undergoing Remediation. Geomicrobiology Journal, 31(7), 605-616. Abstract.

2008

Viles HA, Naylor LA, Carter NEA, Chaput D (2008). Biogeomorphological disturbance regimes: progress in linking ecological and geomorphological systems. Earth Surface Processes and Landforms, 33, 1419-1425. Abstract.

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